convertΒΆ
converts tractogram file formats
Usage
./trekker convert [OPTIONS] <input tractogram> <output tractogram>
Positionals
<input tractogram> TEXT:FILE REQUIRED Input tractogram (.vtk, .tck, .trk)
<output tractogram> TEXT REQUIRED Output tractogram (.vtk, .tck, .trk)
Options
| Option | Description |
|---|---|
| -r, --reference TEXT:FILE | Image to use as reference space (needed for converting .vtk/.tck to .trk, and vice versa). |
| -a, --ascii | Write ASCII output. Only available when the output is .vtk. |
General options
| Option | Description |
|---|---|
| -h, --help | Print this help message and exit. |
| -n, --numberOfThreads INT | Number of threads. |
| -v, --verbose TEXT | Verbose level. Options are "quiet", "fatal", "error", "warn", "info", and "debug". Default=info. |
| -f, --force | Force overwriting of existing file. |
